| ID | SGR_5560
| Type | CDS
|
| From | 6533753
| nt length | 1995
|
| To | 6535747
| aa length | 664
|
| Gene |
| pI | 5.69
|
| Definition | putative export associated protein
| M.W (Da) | 69034
|
| Note |
| AseI frg. | H
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category |
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| avm | SAVERM_6275 putative export associated protein | 749 | 0.0e+00
|
| coel | SCO1964 putative export associated protein | 853 | 0.0e+00
|
| sam | SAM23877_2042 putative export associated protein | 814 | 0.0e+00
|
| kan | CP970_33105 export associated protein | 555 | 0.0e+00
|
| scab | SCAB69451 putative export associated protein | 827 | 0.0e+00
|
| nfar | nfa55590 putative transporter | 115 | 9.0e-27
|
*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| TerD | 1 | TerD domain | 63-162 | 58.9 | 4e-16
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| NEB52085.1 | export associated protein [Streptomyces griseus]
| 1336 | 9.0e-178 |
| SCE63064.1 | hypothetical protein GA0115261_116651, partial [Streptomyces sp....
| 1335 | 2.0e-177 |
| MYR15648.1 | export associated protein [Streptomyces sp. SID724]
| 1335 | 3.3e-177 |
| WP_012381392.1 | MULTISPECIES: TerD family protein [Streptomyces] >dbj
| 1350 | 4.8e-176 |
| WP_030705123.1 | TerD family protein [Streptomyces griseus]
| 1348 | 9.2e-176 |
| WP_003969856.1 | MULTISPECIES: TerD family protein [unclassified Streptomyces...
| 1348 | 1.1e-175 |
|
| 1317 | 2.0e-175 |
| WP_093684892.1 | MULTISPECIES: TerD family protein [unclassified Streptomyces...
| 1344 | 4.5e-175 |
|
| 1306 | 3.3e-173 |
| NEC00668.1 | export associated protein [Streptomyces anulatus]
| 1297 | 1.3e-171 |
PSORT result
| Localization | Certainty | PSORT said
|
| Not Clear | |
|