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IDSGR_5569 TypeCDS
From6545291 nt length2154
To6547444 aa length717
GeneuvrC pI6.03
Definitionputative excinuclease ABC subunit C M.W (Da)78907
Note AseI frg.H
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6291 putative excinuclease ABC subunit C10370.0e+00
coelSCO1953 ABC excision nuclease subunit C11280.0e+00
samSAM23877_2028 UvrABC system protein C11080.0e+00
kanCP970_33200 excinuclease ABC subunit UvrC11130.0e+00
scabSCAB69651 putative excinuclease ABC subunit C7860.0e+00
saceSACE_2138 nuclease subunit of the excinuclease ABC complex8430.0e+00
nfarnfa35940 putative excision nuclease ABC subunit C8370.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

UvrC_HhH_N1UvrC Helix-hairpin-helix N-terminal393-625171.97e-51

GIY-YIG1GIY-YIG catalytic domain19-9243.13.6e-11

HHH_51Helix-hairpin-helix domain641-69139.75.3e-10

HHH_21Helix-hairpin-helix motif647-69338.77.4e-10

UVR1UvrB/uvrC motif210-24232.06.3e-08

HHH1Helix-hairpin-helix motif662-68928.67.5e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012381399.1 MULTISPECIES: excinuclease ABC subunit UvrC [Streptomyces] >... 27640.0e+00
WP_093684889.1 MULTISPECIES: excinuclease ABC subunit UvrC [unclassified St... 27280.0e+00
WP_030705118.1 excinuclease ABC subunit UvrC [Streptomyces griseus] 27250.0e+00
WP_164363499.1 excinuclease ABC subunit UvrC [Streptomyces griseus] >gb 27210.0e+00
WP_217228400.1 excinuclease ABC subunit UvrC [Streptomyces anulatus] 26870.0e+00
WP_161186511.1 excinuclease ABC subunit UvrC, partial [Streptomyces sp. SID... 21280.0e+00
WP_003969865.1 MULTISPECIES: excinuclease ABC subunit UvrC [unclassified St... 21280.0e+00
SCD94098.1 Excinuclease ABC subunit C, partial [Streptomyces sp. OspMP-M43] 21270.0e+00
WP_164340282.1 excinuclease ABC subunit UvrC [Streptomyces anulatus] >gb 21050.0e+00
WP_164222467.1 excinuclease ABC subunit UvrC [Streptomyces anulatus] >gb 21050.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear