-- | --

IDSGR_5572 TypeCDS
From6549458 nt length990
To6550447 aa length329
GenewhiA pI10.56
Definitionputative WhiA protein M.W (Da)34806
Note AseI frg.H
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6294 putative sporulation regulatory protein4577.0e-130
coelSCO1950 hypothetical protein5185.0e-148
samSAM23877_2025 Sporulation transcription regulator WhiA5180.0e+00
kanCP970_33215 DNA-binding protein WhiA5200.0e+00
scabSCAB69681 putative sporulation regulatory protein5161.0e-147
saceSACE_2141 sporulation regulatory protein4485.0e-127
nfarnfa35910 hypothetical protein4276.0e-121

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

WhiA_N1WhiA N-terminal LAGLIDADG-like domain20-10488.91.5e-25

LAGLIDADG_WhiA1WhiA LAGLIDADG-like domain127-21883.48.2e-24

HTH_WhiA1WhiA C-terminal HTH domain221-30368.15.9e-19

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003969868.1 MULTISPECIES: DNA-binding protein WhiA [Streptomyces] >sp 13530.0e+00
WP_032790781.1 MULTISPECIES: DNA-binding protein WhiA [Streptomyces] >gb 13510.0e+00
WP_073769164.1 DNA-binding protein WhiA [Streptomyces sp. CB02366] >gb 13500.0e+00
WP_006123686.1 MULTISPECIES: DNA-binding protein WhiA [Streptomyces] >gb 13490.0e+00
WP_103535504.1 DNA-binding protein WhiA [Streptomyces sp. SM11] 13480.0e+00
WP_185301503.1 DNA-binding protein WhiA [Streptomyces finlayi] >gb 13470.0e+00
WP_030078784.1 MULTISPECIES: DNA-binding protein WhiA [Streptomyces] >lcl 13470.0e+00
WP_205082213.1 DNA-binding protein WhiA [Streptomyces sp. RHZ10] >lcl 13450.0e+00
GGW05641.1 sporulation transcription regulator WhiA [Streptomyces globispor... 13380.0e+00
WP_069172156.1 DNA-binding protein WhiA [Streptomyces griseus] 13380.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear