| ID | SGR_5644
| Type | CDS
|
| From | 6623162
| nt length | 1665
|
| To | 6621498
| aa length | 554
|
| Gene | cobQ1
| pI | 5.44
|
| Definition | putative cobyric acid synthase
| M.W (Da) | 58478
|
| Note |
| AseI frg. | I
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category |
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| avm | SAVERM_6416 putative cobyric acid synthase | 784 | 0.0e+00
|
| coel | SCO1848 cobyric acid synthase | 849 | 0.0e+00
|
| sam | SAM23877_1920 Cobyric acid synthase | 852 | 0.0e+00
|
| kan | CP970_33825 cobyric acid synthase | 842 | 0.0e+00
|
| scab | SCAB70871 putative cobyric acid synthase | 868 | 0.0e+00
|
| sace | SACE_5983 cobyric acid synthase | 562 | 3.0e-161
|
| nfar | nfa40880 putative cobyric acid synthase | 515 | 5.0e-147
|
*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| GATase_3 | 1 | CobB/CobQ-like glutamine amidotransferase domain | 262-432 | 146.0 | 9.4e-43
|
| CbiA | 1 | CobQ/CobB/MinD/ParA nucleotide binding domain | 5-232 | 67.3 | 1.1e-18
|
| AAA_26 | 1 | AAA domain | 5-231 | 50.3 | 2.2e-13
|
| GATase | 1 | Glutamine amidotransferase class-I | 295-368 | 25.9 | 6.4e-06
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| Not Clear | |
|