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IDSGR_5645 TypeCDS
From6624184 nt length1026
To6623159 aa length341
GenecobD pI12.02
Definitionputative cobalamin biosynthesis protein M.W (Da)34544
Note AseI frg.I
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6417 putative cobalamin biosynthesis protein3532.0e-98
coelSCO1847 cobalamin biosynthesis protein4092.0e-115
samSAM23877_1919 Cobalamin biosynthesis protein CobD4385.0e-156
kanCP970_33830 cobalamin biosynthesis protein4334.0e-154
scabSCAB70881 putative cobalamin biosynthesis protein4132.0e-116
saceSACE_1574 cobalamin biosynthesis protein2672.0e-72
nfarnfa16270 putative cobalamin biosynthesis protein2553.0e-69

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

CobD_Cbib1CobD/Cbib protein13-290285.63.1e-85

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003969949.1 MULTISPECIES: cobalamin biosynthesis protein [Streptomyces] ... 11283.4e-152
WP_030705041.1 MULTISPECIES: cobalamin biosynthesis protein [Streptomyces] ... 11283.6e-152
WP_219206558.1 cobalamin biosynthesis protein [Streptomyces griseus] >lcl 11232.3e-151
NDZ58007.1 cobalamin biosynthesis protein [Streptomyces anulatus] 11179.1e-151
WP_047176005.1 cobalamin biosynthesis protein [Streptomyces sp. MNU77] >gb 11179.1e-151
WP_087766918.1 cobalamin biosynthesis protein [Streptomyces sp. CS057] >gb 11151.6e-150
WP_217228505.1 cobalamin biosynthesis protein [Streptomyces anulatus] 11143.4e-150
NEB99188.1 cobalamin biosynthesis protein [Streptomyces anulatus] 11116.7e-150
WP_215111690.1 cobalamin biosynthesis protein, partial [Streptomyces sp. Mc... 11098.3e-150
NEB39089.1 cobalamin biosynthesis protein [Streptomyces sp. SID14515] 11091.9e-149

PSORT result

LocalizationCertaintyPSORT said
Not Clear