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IDSGR_5666 TypeCDS
From6642599 nt length1026
To6641574 aa length341
GenednaQ1 pI6.52
Definitionputative DNA polymerase III epsilon subunit M.W (Da)37110
Note AseI frg.I
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6439 putative DNA polymerase III epsilon subunit4786.0e-136
coelSCO1827 putative DNA polymerase III epsilon chain5132.0e-146
samSAM23877_1898 putative DNA polymerase III%2C epsilon chain5050.0e+00
kanCP970_33945 DEDDh family exonuclease5011.0e-180
scabSCAB71161 hypothetical protein5261.0e-150

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

RNase_T1Exonuclease21-17382.25.6e-23

BRCT1BRCA1 C Terminus (BRCT) domain243-31226.84.8e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003969969.1 MULTISPECIES: DEDDh family exonuclease [Streptomyces] >gb 16620.0e+00
WP_030705028.1 MULTISPECIES: DEDDh family exonuclease [Streptomyces] >lcl 16610.0e+00
WP_202465303.1 DEDDh family exonuclease [Streptomyces sp. SID724] 16590.0e+00
MYR14115.1 DEDDh family exonuclease [Streptomyces sp. SID724] 16570.0e+00
WP_030813887.1 MULTISPECIES: DEDDh family exonuclease [Streptomyces] >lcl 16510.0e+00
WP_205082516.1 DEDDh family exonuclease [Streptomyces sp. RHZ10] >lcl 16510.0e+00
RDL03778.1 DNA polymerase III epsilon subunit [Streptomyces sp. HB202] 16510.0e+00
WP_073776369.1 DEDDh family exonuclease [Streptomyces sp. TSRI0445] >gb 16500.0e+00
GGW05356.1 DNA polymerase III subunit epsilon [Streptomyces globisporus] 16480.0e+00
WP_044377370.1 MULTISPECIES: DEDDh family exonuclease [Streptomyces] >gb 16480.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear