-- | --

IDSGR_5690 TypeCDS
From6666783 nt length2595
To6669377 aa length864
Gene pI7.31
Definitionputative ABC transporter ATP-binding protein M.W (Da)93367
Note AseI frg.I
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6472 putative ABC transporter ATP-binding protein10830.0e+00
coelSCO1806 conserved hypothetical protein10960.0e+00
samSAM23877_1873 putative ABC transporter ATP-binding protein12300.0e+00
kanCP970_34110 FHA domain-containing protein12810.0e+00
scabSCAB71431 putative ABC transporter ATP-binding protein12730.0e+00
nfarnfa8640 putative ABC transporter ATP-binding protein5093.0e-145

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

FHA2FHA domain25-88, 212-278122.84.7e-36

ABC_tran1ABC transporter316-463108.53.2e-31

Yop-YscD_cpl2Inner membrane component of T3SS, cytoplasmic domain13-89, 208-28597.83.2e-28

ABC2_membrane1ABC-2 type transporter589-79972.33.3e-20

ABC2_membrane_31ABC-2 family transporter protein639-85161.09.5e-17

AAA_211AAA domain, putative AbiEii toxin, Type IV TA system434-49550.81.8e-13

ABC2_membrane_21ABC-2 family transporter protein680-85526.92.4e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012381467.1 ABC transporter ATP-binding protein/permease [Streptomyces g... 38780.0e+00
WP_202549855.1 ABC transporter ATP-binding protein/permease [Streptomyces s... 38200.0e+00
WP_079147537.1 ABC transporter ATP-binding protein/permease [Streptomyces g... 37700.0e+00
NEB52834.1 FHA domain-containing protein [Streptomyces griseus] 34170.0e+00
WP_030705010.1 ABC transporter ATP-binding protein/permease [Streptomyces g... 34170.0e+00
WP_202465479.1 ABC transporter ATP-binding protein/permease [Streptomyces s... 34150.0e+00
WP_203638262.1 ABC transporter ATP-binding protein/permease [Streptomyces g... 34150.0e+00
WP_003969995.1 MULTISPECIES: ABC transporter ATP-binding protein/permease [... 34140.0e+00
MYR15242.1 FHA domain-containing protein [Streptomyces sp. SID724] 34140.0e+00
WP_202463408.1 MULTISPECIES: ABC transporter ATP-binding protein/permease [... 34100.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear