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IDSGR_5728 TypeCDS
From6714581 nt length657
To6715237 aa length218
GenescpB pI4.37
Definitionputative transcriptional regulator M.W (Da)23843
Note AseI frg.I
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6511 putative chromosome segregation and condensation protein B3208.0e-89
coelSCO1769 hypothetical protein3376.0e-94
samSAM23877_1827 hypothetical protein3621.0e-129
kanCP970_34330 SMC-Scp complex subunit ScpB3641.0e-130
scabSCAB71871 putative chromosome segregation and condensation protein B3522.0e-98
saceSACE_5238 putative segregation and condensation protein B1831.0e-47
nfarnfa20100 hypothetical protein1853.0e-48

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SMC_ScpB1Segregation and condensation complex subunit ScpB22-179187.61e-55

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003970033.1 MULTISPECIES: SMC-Scp complex subunit ScpB [Streptomyces] >g... 9643.1e-131
WP_030590389.1 MULTISPECIES: SMC-Scp complex subunit ScpB [Streptomyces] >g... 9601.2e-130
WP_164361296.1 SMC-Scp complex subunit ScpB [Streptomyces griseus] >gb 9583.4e-130
WP_032775769.1 SMC-Scp complex subunit ScpB [Streptomyces albus] 9565.6e-130
WP_075267091.1 MULTISPECIES: SMC-Scp complex subunit ScpB [Streptomyces] >g... 9559.2e-130
WP_097937531.1 MULTISPECIES: SMC-Scp complex subunit ScpB [unclassified Str... 9541.2e-129
WP_030799558.1 MULTISPECIES: SMC-Scp complex subunit ScpB [Streptomyces] >g... 9541.2e-129
WP_032788254.1 SMC-Scp complex subunit ScpB [Streptomyces sp. JS01] >gb 9541.3e-129
WP_118900972.1 SMC-Scp complex subunit ScpB [Streptomyces globisporus] >gb 9531.4e-129
WP_097878856.1 MULTISPECIES: SMC-Scp complex subunit ScpB [unclassified Str... 9531.5e-129

PSORT result

LocalizationCertaintyPSORT said
Not Clear