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IDSGR_5729 TypeCDS
From6715234 nt length1305
To6716538 aa length434
GenerluB pI11.04
Definitionputative pseudouridine synthase M.W (Da)45869
Note AseI frg.I
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6512 putative pseudouridine synthase4501.0e-127
coelSCO1768 putative pseudouridine synthase5423.0e-155
samSAM23877_1826 Pseudouridine synthase4911.0e-174
kanCP970_34335 rRNA pseudouridine synthase5200.0e+00
scabSCAB71881 putative pseudouridine synthase5141.0e-146
saceSACE_5237 pseudouridylate synthase ribosomal large subunit2502.0e-67
nfarnfa20110 putative pseudouridine synthase2193.0e-58

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

PseudoU_synth_21RNA pseudouridylate synthase260-39082.23.9e-23

S41S4 domain198-24545.83.3e-12

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_201045747.1 rRNA pseudouridine synthase [Streptomyces sp. MBT55] >lcl 14870.0e+00
WP_118900970.1 rRNA pseudouridine synthase [Streptomyces globisporus] >gb 14840.0e+00
WP_042497461.1 MULTISPECIES: rRNA pseudouridine synthase [Streptomyces] >lc... 14830.0e+00
WP_032788252.1 MULTISPECIES: rRNA pseudouridine synthase [unclassified Stre... 14830.0e+00
WP_010056943.1 MULTISPECIES: rRNA pseudouridine synthase [Streptomyces] >gb... 14830.0e+00
WP_200742142.1 MULTISPECIES: rRNA pseudouridine synthase [unclassified Stre... 14830.0e+00
WP_086670109.1 rRNA pseudouridine synthase [Streptomyces albovinaceus] 14820.0e+00
WP_030706093.1 rRNA pseudouridine synthase [Streptomyces griseus] 14820.0e+00
WP_126932224.1 rRNA pseudouridine synthase [Streptomyces sp. NP10] >gb 14820.0e+00
BAG22558.1 putative pseudouridine synthase [Streptomyces griseus subsp. gri... 14820.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear