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IDSGR_5741 TypeCDS
From6725203 nt length1470
To6726672 aa length489
Gene pI5.13
Definitionputative GTP-binding protein M.W (Da)53058
Note AseI frg.I
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6524 putative GTP-binding protein8370.0e+00
coelSCO1758 putative GTP binding protein8710.0e+00
samSAM23877_1816 GTPase Der8730.0e+00
kanCP970_34395 ribosome biogenesis GTPase Der8460.0e+00
scabSCAB72001 putative GTP-binding protein8680.0e+00
saceSACE_5232 small GTP-binding protein domain5655.0e-162
nfarnfa20130 putative GTP-binding protein5676.0e-163

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

MMR_HSR1250S ribosome-binding GTPase54-168, 228-346161.27.4e-48

FeoB_N2Ferrous iron transport protein B54-171, 228-39187.94.3e-25

KH_dom-like1KH-domain-like of EngA bacterial GTPase enzymes, C-terminal402-48087.06.9e-25

GTP_EFTU2Elongation factor Tu GTP binding domain83-172, 302-39568.45.4e-19

AIG11AIG1 family55-15746.91.8e-12

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012381502.1 MULTISPECIES: ribosome biogenesis GTPase Der [Streptomyces] ... 22420.0e+00
WP_164222159.1 ribosome biogenesis GTPase Der [Streptomyces anulatus] >gb 22390.0e+00
WP_003970046.1 MULTISPECIES: ribosome biogenesis GTPase Der [unclassified S... 22370.0e+00
WP_030706086.1 ribosome biogenesis GTPase Der [Streptomyces griseus] 22360.0e+00
WP_030631001.1 MULTISPECIES: ribosome biogenesis GTPase Der [Streptomyces] ... 22330.0e+00
WP_073805834.1 MULTISPECIES: ribosome biogenesis GTPase Der [unclassified S... 22320.0e+00
WP_030085798.1 MULTISPECIES: ribosome biogenesis GTPase Der [Streptomyces] 22290.0e+00
WP_065483435.1 ribosome biogenesis GTPase Der [Streptomyces sp. PTY087I2] >... 22270.0e+00
WP_097967714.1 MULTISPECIES: ribosome biogenesis GTPase Der [Streptomyces] 22250.0e+00
WP_175466300.1 MULTISPECIES: ribosome biogenesis GTPase Der [unclassified S... 22230.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear