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IDSGR_5775 TypeCDS
From6768556 nt length984
To6769539 aa length327
Gene pI5.2
Definitionputative secreted protein M.W (Da)34074
Note AseI frg.I
SignalP v.4.0Signal peptide | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO1138 putative secreted protein5022.0e-143
samSAM23877_1220 putative secreted protein4792.0e-172
kanCP970_34635 tripartite tricarboxylate transporter substrate binding protein4701.0e-168
scabSCAB7931 4922.0e-140
saceSACE_5360 putative tricarboxylic transport membrane protein3949.0e-111

*coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

TctC1Tripartite tricarboxylate transporter family receptor54-327109.31.5e-31

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003970083.1 MULTISPECIES: tripartite tricarboxylate transporter substrat... 14940.0e+00
WP_202465538.1 MULTISPECIES: tripartite tricarboxylate transporter substrat... 14940.0e+00
WP_202464448.1 tripartite tricarboxylate transporter substrate binding prot... 14910.0e+00
WP_093562920.1 tripartite tricarboxylate transporter substrate binding prot... 14910.0e+00
WP_093683428.1 tripartite tricarboxylate transporter substrate binding prot... 14900.0e+00
WP_047175895.1 MULTISPECIES: tripartite tricarboxylate transporter substrat... 14890.0e+00
WP_203620777.1 tripartite tricarboxylate transporter substrate binding prot... 14840.0e+00
NEB97120.1 tripartite tricarboxylate transporter substrate binding protein [... 14840.0e+00
WP_203608771.1 tripartite tricarboxylate transporter substrate binding prot... 14810.0e+00
WP_050359553.1 MULTISPECIES: tripartite tricarboxylate transporter substrat... 14800.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear