-- | --

IDSGR_5781 TypeCDS
From6774706 nt length375
To6775080 aa length124
Gene pI8.96
Definitionputative GntR-family transcriptional regulator M.W (Da)12821
Note AseI frg.I
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6565 putative GntR-family transcriptional regulator1152.0e-27
coelSCO1728 putative gntR-family transcriptional regulator1482.0e-37
samSAM23877_1789 putative gntR-family transcriptional regulator1492.0e-48
kanCP970_34670 GntR family transcriptional regulator1271.0e-39
scabSCAB72381 putative GntR-family transcriptional regulator1429.0e-36
saceSACE_5641 GntR-family transcriptional regulator1082.0e-25
nfarnfa49100 putative transcriptional regulator974.0e-22

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

GntR1Bacterial regulatory proteins, gntR family15-7854.65.6e-15

HTH_411Helix-turn-helix domain34-7835.84.2e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012381530.1 MULTISPECIES: GntR family transcriptional regulator [Strepto... 4291.2e-52
WP_219206592.1 GntR family transcriptional regulator [Streptomyces griseus]... 4281.4e-52
WP_003970089.1 MULTISPECIES: GntR family transcriptional regulator [Strepto... 4211.5e-51
WP_047175890.1 MULTISPECIES: GntR family transcriptional regulator [Strepto... 4133.1e-50
WP_098024561.1 MULTISPECIES: GntR family transcriptional regulator [Strepto... 4124.2e-50
WP_030583885.1 MULTISPECIES: GntR family transcriptional regulator [Strepto... 4124.3e-50
WP_097968193.1 GntR family transcriptional regulator [Streptomyces sp. or20... 4115.1e-50
WP_007448684.1 MULTISPECIES: GntR family transcriptional regulator [Strepto... 4115.9e-50
WP_215106112.1 GntR family transcriptional regulator [Streptomyces sp. McG3... 4116.0e-50
WP_097869253.1 GntR family transcriptional regulator [Streptomyces sp. rh34... 4116.7e-50

PSORT result

LocalizationCertaintyPSORT said
Not Clear