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IDSGR_5826 TypeCDS
From6823047 nt length939
To6822109 aa length312
Gene pI9.99
Definitionputative ribosomal pseudouridine synthase M.W (Da)34596
Note AseI frg.I
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6707 putative ribosomal pseudouridine synthase3484.0e-97
coelSCO1625 putative ribosomal pseudouridine synthase3562.0e-99
samSAM23877_1680 Ribosomal pseudouridine synthase3743.0e-131
kanCP970_35580 pseudouridylate synthase3809.0e-134
scabSCAB73731 putative ribosomal pseudouridine synthase3493.0e-97
saceSACE_3351 ribosomal pseudouridine synthase3584.0e-100
nfarnfa7490 putative RNA pseudouridylate synthase3353.0e-93

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

PseudoU_synth_21RNA pseudouridylate synthase107-25367.61.2e-18

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012381560.1 MULTISPECIES: pseudouridylate synthase [Streptomyces] >lcl 13350.0e+00
WP_093564010.1 MULTISPECIES: pseudouridylate synthase [unclassified Strepto... 13290.0e+00
WP_219566070.1 pseudouridylate synthase [Streptomyces griseus] 13290.0e+00
WP_164360353.1 pseudouridylate synthase [Streptomyces griseus] >gb 13280.0e+00
WP_161184506.1 RluA family pseudouridine synthase [Streptomyces sp. SID724]... 13110.0e+00
WP_003970134.1 MULTISPECIES: pseudouridylate synthase [unclassified Strepto... 12794.0e-176
NED06271.1 pseudouridylate synthase [Streptomyces sp. SID6648] 12691.4e-174
WP_032774229.1 pseudouridylate synthase [Streptomyces griseus] 12566.9e-173
WP_161322198.1 pseudouridylate synthase [Streptomyces sp. SID5614] >gb 12542.6e-172
WP_097975920.1 pseudouridylate synthase [Streptomyces sp. gb14] 12543.1e-172

PSORT result

LocalizationCertaintyPSORT said
Not Clear