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IDSGR_5857 TypeCDS
From6859025 nt length1512
To6860536 aa length503
Gene pI5.02
Definitionputative proteasome component M.W (Da)57046
Note AseI frg.I
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6678 putative proteasome component8880.0e+00
coelSCO1647 hypothetical protein9150.0e+00
samSAM23877_1702 Depupylase9120.0e+00
kanCP970_35460 proteasome accessory factor PafA29330.0e+00
scabSCAB73451 putative proteasome component9260.0e+00
saceSACE_2249 putative proteasome component6490.0e+00
nfarnfa31740 putative proteasome component6360.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Pup_ligase1Pup-ligase protein5-457635.06.6e-191

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_219206617.1 proteasome accessory factor PafA2 [Streptomyces griseus] >lc... 24030.0e+00
WP_003970165.1 MULTISPECIES: proteasome accessory factor PafA2 [Streptomyce... 24030.0e+00
WP_215102868.1 proteasome accessory factor PafA2 [Streptomyces sp. McG3] >l... 23810.0e+00
WP_097866992.1 proteasome accessory factor PafA2 [Streptomyces sp. rh34] 23800.0e+00
WP_050359488.1 MULTISPECIES: proteasome accessory factor PafA2 [Streptomyce... 23800.0e+00
WP_217229364.1 proteasome accessory factor PafA2 [Streptomyces anulatus] 23660.0e+00
WP_073805735.1 MULTISPECIES: proteasome accessory factor PafA2 [unclassifie... 23660.0e+00
WP_219609183.1 proteasome accessory factor PafA2 [Streptomyces anulatus] >g... 23650.0e+00
WP_073745424.1 proteasome accessory factor PafA2 [Streptomyces sp. CB02115]... 23640.0e+00
WP_190007255.1 proteasome accessory factor PafA2 [Streptomyces anulatus] >d... 23620.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear