| ID | SGR_5889
| Type | CDS
|
| From | 6891859
| nt length | 924
|
| To | 6890936
| aa length | 307
|
| Gene |
| pI | 4.44
|
| Definition | putative 5^-3^ exonuclease
| M.W (Da) | 33130
|
| Note |
| AseI frg. | B
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category |
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| avm | SAVERM_6714 putative 5'-3' exonuclease | 464 | 9.0e-132
|
| coel | SCO1622 putative 5'-3' exonuclease | 458 | 3.0e-130
|
| sam | SAM23877_1677 5'-3' exonuclease | 482 | 4.0e-174
|
| kan | CP970_35595 5'-3' exonuclease | 503 | 0.0e+00
|
| scab | SCAB73781 putative 5'-3' exonuclease | 495 | 3.0e-141
|
| sace | SACE_2270 potential 5'-3' exonuclease | 266 | 3.0e-72
|
| nfar | nfa31600 putative 5'-3' exonuclease | 205 | 4.0e-54
|
*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| 5_3_exonuc_N | 1 | 5'-3' exonuclease, N-terminal resolvase-like domain | 4-183 | 160.1 | 3.7e-47
|
| 5_3_exonuc | 1 | 5'-3' exonuclease, C-terminal SAM fold | 188-270 | 72.1 | 4.1e-20
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| Not Clear | |
|