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IDSGR_5890 TypeCDS
From6892105 nt length1137
To6893241 aa length378
GeneopuAA pI5.18
Definitionputative glycine betaine ABC transporter ATP-binding protein M.W (Da)40747
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6715 putative glycine betaine ABC transport ATP-binding protein4755.0e-135
coelSCO1621 opuAA glycine betaine transport ATP-binding protein5018.0e-143
samSAM23877_1676 Glycine betaine transport ATP-binding protein5040.0e+00
kanCP970_35600 glycine betaine/L-proline ABC transporter ATP-binding protein5750.0e+00
saceSACE_2410 putative glycine betaine/proline ABC transporter3892.0e-109

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC_tran1ABC transporter44-190113.78.3e-33

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003970197.1 MULTISPECIES: glycine betaine/L-proline ABC transporter ATP-... 17830.0e+00
WP_219206630.1 betaine/proline/choline family ABC transporter ATP-binding p... 17760.0e+00
WP_202464493.1 MULTISPECIES: glycine betaine/L-proline ABC transporter ATP-... 17640.0e+00
WP_215106752.1 betaine/proline/choline family ABC transporter ATP-binding p... 17590.0e+00
WP_219609141.1 betaine/proline/choline family ABC transporter ATP-binding p... 17470.0e+00
NDZ60353.1 glycine betaine/L-proline ABC transporter ATP-binding protein [St... 17430.0e+00
WP_097964275.1 glycine betaine/L-proline ABC transporter ATP-binding protei... 17420.0e+00
WP_073805712.1 MULTISPECIES: glycine betaine/L-proline ABC transporter ATP-... 17410.0e+00
WP_217230064.1 betaine/proline/choline family ABC transporter ATP-binding p... 17380.0e+00
WP_203621970.1 glycine betaine/L-proline ABC transporter ATP-binding protei... 17270.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear