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IDSGR_6022 TypeCDS
From7039100 nt length2577
To7041676 aa length858
GenerelA1 pI9.86
Definitionputative ppGpp synthetase M.W (Da)93974
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6840 putative ppGpp synthetase13970.0e+00
coelSCO1513 relA GTP pyrophosphokinase14910.0e+00
samSAM23877_1564 GTP pyrophosphokinase14800.0e+00
kanCP970_36290 bifunctional (p)ppGpp synthetase/guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase15140.0e+00
scabSCAB74961 putative ppGpp synthetase14520.0e+00
saceSACE_2028 GTP pyrophosphokinase10500.0e+00
nfarnfa36840 putative ppGpp synthetase9960.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HD_41HD domain143-290172.74e-51

RelA_SpoT1Region found in RelA / SpoT proteins350-459128.11.7e-37

TGS1TGS domain517-57677.45.6e-22

ACT_41ACT domain775-85162.05.6e-17

ACT1ACT domain781-84446.71.8e-12

HD1HD domain162-25943.13.9e-11

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_137232289.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosp... 39780.0e+00
WP_193464056.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosp... 39780.0e+00
WP_030085935.1 MULTISPECIES: bifunctional (p)ppGpp synthetase/guanosine-3',... 39770.0e+00
WP_012381673.1 MULTISPECIES: bifunctional (p)ppGpp synthetase/guanosine-3',... 39760.0e+00
WP_097986253.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosp... 39750.0e+00
WP_003970335.1 MULTISPECIES: bifunctional (p)ppGpp synthetase/guanosine-3',... 39750.0e+00
WP_032787956.1 MULTISPECIES: bifunctional (p)ppGpp synthetase/guanosine-3',... 39720.0e+00
WP_097972238.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosp... 39720.0e+00
WP_030712563.1 MULTISPECIES: bifunctional (p)ppGpp synthetase/guanosine-3',... 39720.0e+00
WP_205082988.1 RelA/SpoT family protein [Streptomyces sp. RHZ10] >lcl 39710.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear