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IDSGR_6054 TypeCDS
From7077178 nt length324
To7077501 aa length107
Gene pI11.15
Definitionputative integration host factor M.W (Da)11464
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6870 putative integration host factor1542.0e-39
coelSCO1480 conserved hypothetical protein2021.0e-53
samSAM23877_1532 hypothetical protein2028.0e-70
kanCP970_36465 30S ribosomal protein S132041.0e-70
scabSCAB75261 putative integration host factor2021.0e-53
saceSACE_2099 putative integration host factor1005.0e-23

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result

no hits.

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003970367.1 MULTISPECIES: integration host factor [Streptomyces] >gb 4206.9e-52
WP_073502779.1 MULTISPECIES: integration host factor [Streptomyces] >emb 4181.5e-51
WP_202232479.1 integration host factor [Streptomyces sp. SN-593] >dbj 4171.9e-51
WP_040019917.1 MULTISPECIES: integration host factor [unclassified Streptom... 4172.0e-51
WP_179184035.1 integration host factor [Streptomyces sp. CB04723] >gb 4162.9e-51
WP_030584134.1 MULTISPECIES: integration host factor [Streptomyces] >lcl 4154.3e-51
WP_024490957.1 MULTISPECIES: integration host factor [Streptomyces] >lcl 4154.6e-51
WP_031097780.1 MULTISPECIES: integration host factor [Streptomyces] >gb 4154.8e-51
WP_103887661.1 integration host factor [Streptomyces yanglinensis] >emb 4154.8e-51
WP_003956414.1 MULTISPECIES: integration host factor [Streptomyces] >gb 4145.8e-51

PSORT result

LocalizationCertaintyPSORT said
Not Clear