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IDSGR_6111 TypeCDS
From7203700 nt length375
To7203326 aa length124
Gene pI5.74
Definitionconserved hypothetical protein M.W (Da)13936
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6925 hypothetical protein1966.0e-52
coelSCO1421 hypothetical protein2143.0e-57
samSAM23877_1481 RNA polymerase-binding protein RbpA2251.0e-78
kanCP970_36995 RNA polymerase-binding protein RbpA2517.0e-89
scabSCAB75841 hypothetical protein1921.0e-50
saceSACE_2290 hypothetical protein1275.0e-31
nfarnfa31140 hypothetical protein1051.0e-24

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

RbpA1RNA polymerase-binding protein4-107142.26.7e-42

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003959706.1 MULTISPECIES: RNA polymerase-binding protein RbpA [Streptomy... 5227.6e-67
WP_003946969.1 MULTISPECIES: RNA polymerase-binding protein RbpA [Streptomy... 5182.6e-66
WP_056703423.1 RNA polymerase-binding protein RbpA, partial [Streptomyces s... 5182.9e-66
WP_030757047.1 MULTISPECIES: RNA polymerase-binding protein RbpA [unclassif... 5183.0e-66
WP_219665511.1 RNA polymerase-binding protein RbpA [Streptomyces bambusae] ... 5174.0e-66
WP_125646061.1 MULTISPECIES: RNA polymerase-binding protein RbpA [unclassif... 5174.1e-66
WP_007262928.1 MULTISPECIES: RNA polymerase-binding protein RbpA [Streptomy... 5174.3e-66
WP_184576099.1 RNA polymerase-binding protein RbpA [Streptomyces zagrosensi... 5165.9e-66
WP_030360404.1 MULTISPECIES: RNA polymerase-binding protein RbpA [Streptomy... 5166.3e-66
WP_030907058.1 MULTISPECIES: RNA polymerase-binding protein RbpA [Streptomy... 5157.9e-66

PSORT result

LocalizationCertaintyPSORT said
Not Clear