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IDSGR_6143 TypeCDS
From7252848 nt length333
To7253180 aa length110
Gene pI10.22
Definitionputative membrane protein M.W (Da)11321
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6979 putative membrane protein1327.0e-33
coelSCO1386 putative integral membrane protein1711.0e-44
samSAM23877_1444 conserved membrane protein of unknown function1711.0e-57
kanCP970_37265 DUF1290 domain-containing protein1962.0e-67
scabSCAB76251 putative membrane protein1959.0e-52

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DUF12901Protein of unknown function (DUF1290)21-108114.02.4e-33

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_223184616.1 small basic family protein [Streptomyces sp. CBMA152] 3685.8e-44
MQS37760.1 DUF1290 domain-containing protein [Streptomyces katsurahamanus] >... 3696.4e-44
MYT57714.1 DUF1290 domain-containing protein [Streptomyces sp. SID7834] >dbj... 3686.5e-44
WP_125651314.1 MULTISPECIES: small basic family protein [unclassified Strep... 3686.8e-44
WP_202435743.1 small basic family protein, partial [Streptomyces sp. SID783... 3676.9e-44
WP_189973628.1 small basic family protein [Streptomyces avidinii] >lcl 3687.0e-44
GGT92097.1 membrane protein [Streptomyces violascens] >dbj 3677.0e-44
WP_017948521.1 MULTISPECIES: small basic family protein [Streptomyces] >gb 3687.0e-44
WP_153484853.1 MULTISPECIES: small basic family protein [Streptomyces] 3687.4e-44
WP_212765603.1 DUF1290 domain-containing protein [Streptomyces sp. PKU-MA01... 3688.1e-44

PSORT result

LocalizationCertaintyPSORT said
Not Clear