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IDSGR_6249 TypeCDS
From7424206 nt length1170
To7425375 aa length389
GenesbcD pI5.29
Definitionputative exonuclease M.W (Da)42181
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_7055 putative ATP-dependent dsDNA exonuclease5416.0e-155
coelSCO1301 putative exonuclease5883.0e-169
samSAM23877_1381 putative exonuclease5970.0e+00
kanCP970_40600 exonuclease SbcCD subunit D5670.0e+00
scabSCAB77861 putative ATP-dependent dsDNA exonuclease5332.0e-152
saceSACE_0952 putative ATP-dependent dsDNA exonuclease3571.0e-99
nfarnfa47930 putative ATP-dependent dsDNA exonuclease3001.0e-82

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Metallophos1Calcineurin-like phosphoesterase1-21755.21.2e-14

Metallophos_21Calcineurin-like phosphoesterase superfamily domain1-21935.11.3e-08

SbcD_C1Type 5 capsule protein repressor C-terminal domain269-35534.22.1e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012381815.1 MULTISPECIES: exonuclease SbcCD subunit D [Streptomyces] >gb... 18120.0e+00
WP_030704290.1 exonuclease SbcCD subunit D [Streptomyces griseus] 18100.0e+00
NEB54281.1 exonuclease SbcCD subunit D [Streptomyces griseus] 18080.0e+00
MYR13343.1 exonuclease subunit SbcD [Streptomyces sp. SID724] 18060.0e+00
WP_003970568.1 exonuclease SbcCD subunit D [Streptomyces sp. ACT-1] >gb 18020.0e+00
WP_202462983.1 MULTISPECIES: exonuclease SbcCD subunit D [unclassified Stre... 17940.0e+00
WP_203638580.1 exonuclease SbcCD subunit D [Streptomyces griseus] 17900.0e+00
WP_202465192.1 exonuclease SbcCD subunit D [Streptomyces sp. SID724] 17900.0e+00
WP_202476816.1 exonuclease SbcCD subunit D [Streptomyces sp. SID4928] 17830.0e+00
WP_032788593.1 MULTISPECIES: exonuclease SbcCD subunit D [unclassified Stre... 17310.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear