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IDSGR_6285 TypeCDS
From7465275 nt length855
To7464421 aa length284
Gene pI8.69
Definitionputative DNA-binding protein M.W (Da)31034
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_7096 putative DNA-binding protein3631.0e-101
coelSCO1242 putative DNA-binding protein3853.0e-108
samSAM23877_1330 putative DNA-binding protein3709.0e-131
kanCP970_40975 XRE family transcriptional regulator3535.0e-124
scabSCAB78261 putative DNA-binding protein3724.0e-104

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain12-7060.71.1e-16

HTH_31Helix-turn-helix16-6526.54.6e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012381839.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 13730.0e+00
WP_030704330.1 Scr1 family TA system antitoxin-like transcriptional regulat... 13700.0e+00
WP_003970603.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 13700.0e+00
WP_093565920.1 Scr1 family TA system antitoxin-like transcriptional regulat... 13630.0e+00
WP_215102201.1 Scr1 family TA system antitoxin-like transcriptional regulat... 12917.8e-179
WP_069736142.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 12856.3e-178
WP_047175534.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 12821.8e-177
WP_199889257.1 Scr1 family TA system antitoxin-like transcriptional regulat... 12812.9e-177
WP_128816980.1 Scr1 family TA system antitoxin-like transcriptional regulat... 12804.2e-177
WP_087767198.1 Scr1 family TA system antitoxin-like transcriptional regulat... 12788.8e-177

PSORT result

LocalizationCertaintyPSORT said
Not Clear