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IDSGR_6320 TypeCDS
From7496543 nt length1536
To7498078 aa length511
GeneligB pI8.26
Definitionputative DNA ligase M.W (Da)54610
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_7136 putative DNA ligase6162.0e-177
coelSCO1202 putative DNA ligase6640.0e+00
samSAM23877_1283 putative DNA ligase6490.0e+00
scabSCAB78681 putative DNA ligase6920.0e+00
saceSACE_0911 DNA ligase I, ATP-dependent (dnl1)4194.0e-118
nfarnfa52520 putative ATP-dependent DNA ligase4123.0e-116

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DNA_ligase_A_M1ATP dependent DNA ligase domain186-385145.61.3e-42

DNA_ligase_A_C1ATP dependent DNA ligase C terminal region404-49554.51.2e-14

DNA_ligase_A_N1DNA ligase N terminus71-13845.11.2e-11

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012381855.1 MULTISPECIES: ATP-dependent DNA ligase [Streptomyces] >sp 19980.0e+00
WP_003970638.1 MULTISPECIES: ATP-dependent DNA ligase [Streptomyces] >gb 19870.0e+00
WP_164360530.1 ATP-dependent DNA ligase [Streptomyces griseus] >gb 19870.0e+00
WP_093562737.1 ATP-dependent DNA ligase [Streptomyces sp. OspMP-M43] >emb 19840.0e+00
WP_093683543.1 MULTISPECIES: ATP-dependent DNA ligase [unclassified Strepto... 19800.0e+00
WP_161184288.1 ATP-dependent DNA ligase [Streptomyces sp. SID724] >gb 19760.0e+00
WP_030582278.1 MULTISPECIES: ATP-dependent DNA ligase [Streptomyces] >gb 18150.0e+00
WP_032765646.1 ATP-dependent DNA ligase [Streptomyces sp. CNS654] 18050.0e+00
WP_097932633.1 MULTISPECIES: ATP-dependent DNA ligase [unclassified Strepto... 18040.0e+00
WP_100564468.1 ATP-dependent DNA ligase [Streptomyces sp. CB02613] >gb 18040.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear