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IDSGR_6374 TypeCDS
From7620861 nt length1254
To7619608 aa length417
Gene pI6.51
Definitionhypothetical protein M.W (Da)44269
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1389 hypothetical protein1073.0e-24
scabSCAB14641 1243.0e-29
nfarnfa3940 hypothetical protein1355.0e-33

*avm, Streptomyces avermitilis; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_301PucR C-terminal helix-turn-helix domain339-39455.53.2e-15

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003970691.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 19730.0e+00
WP_093562373.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 19700.0e+00
WP_215105296.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 18660.0e+00
WP_017627465.1 helix-turn-helix domain-containing protein [Nocardiopsis chr... 9699.7e-126
ALP32048.1 CycH [Streptomyces sp. NCIB 11649] 8007.7e-100
WP_150272411.1 helix-turn-helix domain-containing protein [Streptomyces ven... 7893.3e-98
7701.1e-95
WP_211840393.1 helix-turn-helix domain-containing protein [Saccharopolyspor... 7701.3e-95
WP_053735769.1 helix-turn-helix domain-containing protein [Nocardia sp. NRR... 7203.9e-88
WP_218920537.1 hypothetical protein [Lentzea guizhouensis] 6941.1e-86

PSORT result

LocalizationCertaintyPSORT said
Not Clear