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IDSGR_6665 TypeCDS
From7960428 nt length852
To7959577 aa length283
Gene pI9.11
Definitionputative DNA-binding protein M.W (Da)30745
Note AseI frg.G
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO0891 putative DNA-binding protein.2194.0e-58
scabSCAB5751 2055.0e-54

*coel, Streptomyces coelicolor A3(2); scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain6-8355.54.9e-15

HTH_31Helix-turn-helix35-7726.83.7e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003970982.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 13700.0e+00
WP_093683780.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 13660.0e+00
WP_093566168.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 13650.0e+00
WP_219206926.1 helix-turn-helix domain-containing protein [Streptomyces gri... 13630.0e+00
WP_161184393.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 13570.0e+00
WP_070390131.1 helix-turn-helix domain-containing protein [Streptomyces oli... 12979.2e-180
WP_122619485.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 12901.2e-178
WP_224301750.1 helix-turn-helix transcriptional regulator [Streptomyces oli... 12872.7e-178
WP_224222305.1 helix-turn-helix transcriptional regulator [Streptomyces oli... 12847.6e-178
WP_224339419.1 helix-turn-helix transcriptional regulator [Streptomyces oli... 12795.4e-177

PSORT result

LocalizationCertaintyPSORT said
Not Clear