-- | --

IDSGR_733 TypeCDS
From866233 nt length903
To867135 aa length300
Genesig15 pI4.71
Definitionputative RNA polymerase sigma factor M.W (Da)33067
Note AseI frg.L
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO0600 sig8 RNA polymerase sigma factor sig83478.0e-97

*coel, Streptomyces coelicolor A3(2);

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Sigma70_r41Sigma-70, region 4245-29470.26.6e-20

Sigma70_r21Sigma-70 region 275-14556.22e-15

Sigma70_r31Sigma-70 region 3155-21946.72.3e-12

Sigma70_r4_21Sigma-70, region 4245-29229.44.2e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012378022.1 MULTISPECIES: RNA polymerase sigma factor SigF [Streptomyces... 15660.0e+00
WP_003964615.1 MULTISPECIES: RNA polymerase sigma factor SigF [unclassified... 15640.0e+00
WP_215107334.1 SigB/SigF/SigG family RNA polymerase sigma factor [Streptomy... 14990.0e+00
WP_047180030.1 RNA polymerase sigma factor SigF [Streptomyces sp. MNU77] >g... 14940.0e+00
WP_097965958.1 RNA polymerase sigma factor SigF [Streptomyces sp. or20] 14900.0e+00
WP_087764046.1 MULTISPECIES: RNA polymerase sigma factor SigF [Streptomyces... 14890.0e+00
WP_217230939.1 SigB/SigF/SigG family RNA polymerase sigma factor [Streptomy... 14870.0e+00
WP_097933306.1 MULTISPECIES: RNA polymerase sigma factor SigF [unclassified... 14830.0e+00
WP_073959428.1 MULTISPECIES: RNA polymerase sigma factor SigF [Streptomyces... 14810.0e+00
WP_073868583.1 MULTISPECIES: RNA polymerase sigma factor SigF [unclassified... 14800.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear