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IDSGR_966 TypeCDS
From1143741 nt length912
To1142830 aa length303
GenehopE pI5
Definitionputative squalene/phytoene synthase M.W (Da)32672
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1654 squalene/phytoene synthase3892.0e-109
coelSCO6759 putative phytoene synthase4283.0e-121
samSAM23877_6410 putative phytoene synthase4413.0e-158
kanCP970_04405 squalene synthase HpnC4543.0e-163
scabSCAB13001 squalene/phytoene synthase3601.0e-100
saceSACE_4331 squalene/phytoene synthase1893.0e-49

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SQS_PSY1Squalene/phytoene synthase16-284223.62.7e-66

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003964852.1 MULTISPECIES: squalene synthase HpnC [Streptomyces] >gb 14430.0e+00
MYR12386.1 squalene synthase HpnC [Streptomyces sp. SID724] 14390.0e+00
WP_093683023.1 squalene synthase HpnC [Streptomyces sp. MnatMP-M77] >gb 14380.0e+00
WP_073805268.1 MULTISPECIES: squalene synthase HpnC [unclassified Streptomy... 13870.0e+00
WP_030623260.1 squalene synthase HpnC [Streptomyces albus] 13830.0e+00
WP_193462758.1 squalene synthase HpnC [Streptomyces griseus] >dbj 13820.0e+00
WP_218786911.1 squalene synthase HpnC [Streptomyces sp. WY228] >gb 13810.0e+00
WP_050362116.1 MULTISPECIES: squalene synthase HpnC [Streptomyces] >gb 13810.0e+00
NEB35968.1 squalene synthase HpnC [Streptomyces sp. SID14515] 13800.0e+00
WP_047179845.1 MULTISPECIES: squalene synthase HpnC [unclassified Streptomy... 13790.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear